Vegan Blueberry Lemon Protein Muffins

Featured in: Sweet Treats

These moist and fluffy muffins combine juicy blueberries with bright lemon zest and plant-based protein powder for a nutritious breakfast or snack. The batter comes together quickly with simple pantry staples, and the almond milk and applesauce keep them tender without dairy.

Each muffin delivers 5 grams of protein while staying naturally sweetened with maple syrup. The fresh lemon adds brightness that balances the sweet berries perfectly.

Ready in under 40 minutes, these muffins freeze beautifully for meal prep—simply wrap individually and store for up to two months. They're ideal for busy mornings or post-workout fuel.

Updated on Tue, 10 Feb 2026 11:53:00 GMT
Freshly baked Vegan Blueberry Lemon Protein Muffins on a cooling rack, showcasing golden tops and juicy blueberries. Pin
Freshly baked Vegan Blueberry Lemon Protein Muffins on a cooling rack, showcasing golden tops and juicy blueberries. | garlicgroove.com

My neighbor showed up at my door one Tuesday morning with a bag of fresh blueberries from her garden and a challenge: make her something vegan that didn't taste like cardboard. I'd been experimenting with plant-based baking for months, mostly failing quietly in my kitchen, but something about the bright berries and her skeptical smile made me want to try again. These muffins happened almost by accident that afternoon—lemon zest caught under my fingernails, protein powder creating little clouds as I measured, and somehow the combination just worked. Now she asks for them by name.

I brought a batch to a work potluck once without mentioning they were vegan, just to see what would happen. Three different people came back asking for the recipe, convinced I'd used butter and eggs. One coworker actually tasted the lemon first, squinted, and said they'd never had a muffin that tasted so awake. That moment made me realize these weren't just healthy—they were genuinely delicious on their own terms.

Ingredients

  • All-purpose or whole wheat pastry flour (2 cups): The foundation that keeps everything tender; whole wheat pastry flour adds slight nuttiness if you want more depth.
  • Vegan vanilla protein powder (1 scoop, 30g): This is what transforms muffins from breakfast treat into actual nutrition; don't skip it or use too much or they become chalky.
  • Baking powder and baking soda (1 tablespoon and 1/2 teaspoon): The balance between these two is crucial—too much soda makes them taste metallic, too little and they stay dense.
  • Unsweetened almond milk (3/4 cup): Any plant milk works, though creamier ones like oat milk add richness; cashew milk is my secret weapon.
  • Melted coconut oil (1/3 cup): Brings moisture and richness that plant-based baking desperately needs; neutral oil works but loses the subtle coconut hint.
  • Maple syrup (1/2 cup): Gentler than regular sugar and creates a naturally moist crumb that stays soft for days.
  • Unsweetened applesauce (1/4 cup): Acts as an egg replacer by binding everything together while adding subtle sweetness.
  • Lemon zest and juice (1 large lemon): The soul of these muffins; fresh lemon makes all the difference, and never use bottled juice.
  • Fresh or frozen blueberries (1 1/2 cups): Keep frozen ones unthawed so they don't bleed into the batter and turn everything purple-gray.

Instructions

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Set your stage:
Preheat your oven to 350°F and get your muffin tin ready with liners or a light grease—this moment matters because cold batter hitting a hot surface is where the magic starts.
Combine the dry team:
Whisk flour, protein powder, baking powder, baking soda, and salt in a large bowl until everything is evenly distributed and no lumps hide in the corners. This step prevents pockets of baking soda that taste bitter.
Build the wet mixture:
In another bowl, whisk almond milk, coconut oil, maple syrup, applesauce, vanilla, lemon zest, and lemon juice until the color shifts to pale and everything is fully incorporated. The whisk matters here—you're emulsifying everything so the oil doesn't separate later.
Marry wet and dry gently:
Pour the wet ingredients into the dry and stir just until combined; overmixing develops gluten and creates tough, rubbery muffins that nobody wants. Stop when you still see a few flour streaks.
Fold in the berries:
Use a spatula to carefully fold in the blueberries, being as gentle as if you're tucking in someone you care about. This keeps them whole and suspended throughout instead of sinking to the bottom.
Fill the cups:
Divide batter evenly, filling each cup about 3/4 full so they rise evenly without overflowing and creating a mess in your oven. A small ice cream scoop makes this foolproof.
Bake until golden:
Bake for 20 to 22 minutes until a toothpick inserted in the center comes out clean and the tops are just starting to turn golden. Every oven runs different, so start checking at 19 minutes.
Cool with patience:
Let them rest in the tin for 5 minutes—this sets the structure so they don't fall apart—then transfer to a wire rack. Eating them while still slightly warm is one of life's simple pleasures.
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Measure spices, liquids, and baking ingredients accurately for consistent results in cooking and baking.
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A moist Vegan Blueberry Lemon Protein Muffin split open to reveal a fluffy interior with bright blueberry pockets. Pin
A moist Vegan Blueberry Lemon Protein Muffin split open to reveal a fluffy interior with bright blueberry pockets. | garlicgroove.com

There's something special about pulling warm muffins from the oven and hearing someone bite into one and pause, surprised by how good it tastes. That pause is when food becomes more than nutrition—it becomes a small moment of joy that contradicts whatever doubts they had about vegan baking. I chase that pause every time I bake now.

The Lemon Factor

That burst of lemon isn't decoration—it's the bridge that makes people forget to think about whether these are vegan or not. The zest gives brightness while the juice adds tang that wakes up your taste buds and prevents the muffins from tasting heavy or one-note. If you're someone who loves lemon, add an extra teaspoon of zest and your kitchen will smell like a morning you actually want to wake up for.

Storage and Freezing Wisdom

These muffins stay moist in an airtight container for four days, which is longer than most baked goods have any right to last. They freeze beautifully for up to two months, so you can bake a batch on Sunday and have grab-and-go breakfasts waiting for rushed mornings. I thaw them at room temperature or even eat them straight from frozen with a cup of coffee.

Variations and Swaps

Swap whole wheat pastry flour for regular all-purpose if you want a lighter crumb, or use spelt flour for a slightly earthier, nuttier flavor that pairs beautifully with lemon. You can substitute any plant-based protein powder you have on hand—pea, soy, and rice all work—though some carry stronger flavors so taste as you go. The beauty of this recipe is how flexible it is once you understand the basic structure.

  • Raspberries or blackberries replace blueberries with equally delicious results.
  • Add a teaspoon of fresh thyme or a pinch of cardamom if you want unexpected depth.
  • Use oat milk or cashew milk for different textures and richness levels.
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Freshly baked Vegan Blueberry Lemon Protein Muffins on a cooling rack, showcasing golden tops and juicy blueberries. Pin
Freshly baked Vegan Blueberry Lemon Protein Muffins on a cooling rack, showcasing golden tops and juicy blueberries. | garlicgroove.com

These muffins have become my proof that vegan baking doesn't require sacrifice—just intention and a little bit of love. Bake them for yourself, for skeptics, or for people who just deserve a delicious breakfast.

Recipe Questions

Can I use frozen blueberries?

Yes, frozen blueberries work perfectly in this batter. Do not thaw them before adding—fold them in frozen to prevent bleeding into the batter.

What protein powder works best?

Any vanilla plant-based protein powder performs well. Pea, soy, or rice protein blends all work. Avoid unflavored varieties as they may affect the taste profile.

How should I store these muffins?

Store in an airtight container at room temperature for 3 days, or refrigerate for up to a week. For longer storage, freeze individually wrapped for up to 2 months.

Can I make these gluten-free?

Absolutely. Substitute the all-purpose flour with a 1:1 gluten-free baking blend. The texture remains excellent, and the protein powder helps provide structure.

Why is applesauce included?

Unsweetened applesauce acts as an egg replacer, adding moisture and binding the batter while keeping the muffins tender. It also allows for reduced oil content.

Can I reduce the sweetener?

You can reduce the maple syrup to 1/4 cup for less sweetness, though the muffins will be less moist. The blueberries provide some natural sweetness as well.

Vegan Blueberry Lemon Protein Muffins

Moist vegan muffins with blueberries, lemon zest, and plant protein for a nutritious breakfast.

Prep duration
15 min
Cook duration
22 min
Complete duration
37 min


Complexity Easy

Heritage American

Output 12 Portions

Dietary requirements Vegan, No dairy

Components

Dry Ingredients

01 2 cups all-purpose flour or whole wheat pastry flour
02 1 scoop vegan vanilla protein powder
03 1 tablespoon baking powder
04 1/2 teaspoon baking soda
05 1/4 teaspoon salt

Wet Ingredients

01 3/4 cup unsweetened almond milk or other plant-based milk
02 1/3 cup melted coconut oil or neutral oil
03 1/2 cup maple syrup
04 1/4 cup unsweetened applesauce
05 2 teaspoons pure vanilla extract
06 Zest of 1 large lemon
07 Juice of 1 large lemon, approximately 2 tablespoons

Fold-Ins

01 1 1/2 cups fresh or frozen blueberries, unthawed if frozen

Directions

Step 01

Prepare Oven and Muffin Tin: Preheat oven to 350°F. Line a 12-cup muffin tin with paper liners or lightly grease with oil.

Step 02

Combine Dry Ingredients: In a large mixing bowl, whisk together flour, protein powder, baking powder, baking soda, and salt until evenly distributed.

Step 03

Mix Wet Ingredients: In a separate bowl, combine almond milk, melted coconut oil, maple syrup, applesauce, vanilla extract, lemon zest, and lemon juice. Whisk until completely smooth.

Step 04

Combine Wet and Dry Mixtures: Pour wet ingredients into dry ingredients and stir gently until just combined. Do not overmix to maintain muffin texture.

Step 05

Fold in Blueberries: Gently fold blueberries into batter using a spatula, distributing evenly throughout.

Step 06

Fill Muffin Cups: Divide batter evenly among prepared muffin cups, filling each approximately 3/4 full.

Step 07

Bake Muffins: Bake for 20 to 22 minutes, or until a toothpick inserted into the center emerges clean.

Step 08

Cool and Transfer: Allow muffins to cool in tin for 5 minutes, then transfer to wire rack for complete cooling.

Necessary tools

  • 12-cup muffin tin
  • Large mixing bowls
  • Whisk
  • Measuring cups and spoons
  • Grater or zester for lemon
  • Wire cooling rack

Allergy details

Review each ingredient for potential allergens and speak with a healthcare provider if you're uncertain about anything.
  • Contains wheat and gluten
  • Contains tree nuts if using almond milk or coconut oil
  • Use certified gluten-free flour and nut-free plant-based milk or oil alternatives for allergen sensitivities
  • Always verify individual product labels for undisclosed allergens

Nutrition breakdown (per portion)

These values are provided as estimates only and shouldn't replace professional medical guidance.
  • Energy: 160
  • Fat: 5 g
  • Carbohydrates: 24 g
  • Protein: 5 g